The verification and calibration of a new quasi-linear transport model with a large database of gyrokinetic turbulence simulations is presented in this paper. In a previous paper , a model for the saturated spectrum of electric potential fluctuations was developed based on the properties of the non-linear 3D spectrum. In this paper, a modification to the overall multiplicative factor in this model is found to be necessary to improve the fit to scans of the temperature and density gradients and safety factor. The error in the fit of the quasi-linear fluxes of electron and ion energy fluxes is significantly better than for previous saturation models. The spectral shift model for the impact of equilibrium E ×B velocity shear  and the zonal flow mixing model for electron-scale turbulence  are both revised to be compatible with this new model. The models for the loss of bounce averaging and electron collisions in the TGLF reduced linear equations  are also changed to improve the linear eigenmodes.